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CONSERVED BLOCK MODULE (single alignment mode)


This form is for the single alignment mode. For submitting multiple alignments, please enable batch mode by clicking the button below.

DATA INPUT

Sequence alignments must be in FASTA format. Short example alignments can be loaded via the button below the text box.


  • GENERAL CONSERVED BLOCK PARAMETER VALUES


    Percent accept gaps:

    Amino acid conservation threshold: %

    Amino acid substitution group:

    Minimum size of conserved block (1-10 residues):  

    Maximum size of nonconserved block (1-25 residues):  


    COMBINATION OF CONSERVED BLOCK PROFILES



    INTERSECTION the similarity and entropy profiles (strict)
    UNION the similarity and entropy profiles (lenient)


    CO-ANALYSIS WITH INDEL REGION MODULE



    Co-analysis with indel region module (Use will get conserved block together with indel metrix.)
    Use conserved block module alone




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